MirGeneDB 3.0

MirGeneDB ID

Xbo-Mir-252-P1i

Family name MIR-252 (all species)
Seed UAAGUAG
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1j  Xbo-Mir-252-P2 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cte-Mir-252-P1  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dpu-Mir-252-P1  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1 
Node of Origin (locus) X. bocki
Node of Origin (family) Bilateria
Genome context
(genome.xe)
C11653000: 21-81 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUAAGUAGUAGUGCCGUAGGUAAUCUGAUUUGAGACUUUACCUGCACACUUCUGCUUAUAA
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Structure
          10        20           
C--       U    CC        --|  GA 
   UAAGUAG AGUG  GUAGGUAA  UCU  U
   AUUCGUC UCAC  CGUCCAUU  AGA  U
AAU       U    A-        UC^  GU 
60        50         40        30
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Xbo-Mir-252-P1i_5p

mirBase accessionNone
Sequence
0- CUAAGUAGUAGUGCCGUAGGUAA -23
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Star sequence

Xbo-Mir-252-P1i_3p*

mirBase accessionNone
Sequence
39- ACCUGCACACUUCUGCUUAUAA -61
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