MirGeneDB 3.0

MirGeneDB ID

Lpo-Mir-210-P9

Family name MIR-210 (all species)
Seed UGUGCGU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-210-P8  Lpo-Mir-210-P10  Lpo-Mir-210-P11  Lpo-Mir-210-P12 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)
NW_013667481.1: 202916-202975 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGGGAGCAUGCCGUACAGGUGUUUACAGUAGUUGCUGAACACGACACAAGAUUGUGUUCGAGUCCUCUUGUGCGUGUGACAGCGGCUAUCGUAACGCAUUACAGAUUCAUCGAAGAAGG
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Structure
        10           20        30         40        50         
ACGGGAGCAUGCCGUACAG---|    U  A          A-     A       UUGUGU 
                      GUGUU AC GUAGUUGCUG  ACACG CACAAGA      U
                      CGCAA UG UAUCGGCGAC  UGUGC GUGUUCU      C
GGAAGAAGCUACUUAGACAUUA^    -  C          AG     -       CCUGAG 
.       110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ge Ge So So So To
Star sequence

Lpo-Mir-210-P9_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUUGCUGAACACGACACAAGA -22
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Mature sequence

Lpo-Mir-210-P9_3p

mirBase accessionNone
Sequence
38- UUGUGCGUGUGACAGCGGCUAU -60
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