MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-12-P6

Family name MIR-12 (all species)
Seed GAGUAUU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-12-P5  Lpo-Mir-12-P7  Lpo-Mir-12-P8 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013672844.1: 18331-18392 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAAGCAUGGUGGGACAGCUUCCAGUAGAUGAGUAUUACAUCAGGUACUGGUAUUUUUGAUUUCAUAACCAGUACUUAUGUGAUAUUCGUCUUCUGUUUGCGGCAUGCAUCGGUUCGUUUC
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Structure
        10          20        30        40        50        60 
CCAAAGCAUGGUGGGACA--| UUC   U               C          AUUUUUG 
                    GC   CAG AGAUGAGUAUUACAU AGGUACUGGU       \
                    CG   GUC UCUGCUUAUAGUGUA UUCAUGACCA       A
CUUUGCUUGGCUACGUACGG^ UUU   U               -          AUACUUU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-12-P6_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
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Star sequence

Lpo-Mir-12-P6_3p*
mirBase accessionNone
Sequence 
40- CAGUACUUAUGUGAUAUUCGUC -62
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