MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-12
Paralogues
Orthologues Aae-Mir-12  Bge-Mir-12  Bpl-Mir-12  Cgi-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Esc-Mir-12  Hme-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Npo-Mir-12  Ovu-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Tca-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 X: 14557177-14557240 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12)		 Mir-216-P1 X: 14555683-14555751 [+] UCSC Ensembl
Mir-216-P2 X: 14556662-14556729 [+] UCSC Ensembl
Mir-12 X: 14557177-14557240 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCUGUACGAUGGAGCAGCGUCUGUACGGUUGAGUAUUACAUCAGGUACUGGUGUGCCUGAAAUCCAACAACCAGUACUUGUGUCAUACUACGCCGUGCACGGAUCGCACUAACCGCAUGACCA
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Structure
        10            20        30        40        50        60  
GUCUGUACGAUGGAGCAG----|  CU       UG     U   U           GUGCCUGA 
                      CGU  GUACGGU  AGUAU ACA CAGGUACUGGU        \
                      GCA  CGUGCCG  UCAUA UGU GUUCAUGACCA        A
ACCAGUACGCCAAUCACGCUAG^  --       CA     C   -           ACAACCUA 
  120       110       100          90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
He Wh
Mature sequence

Dsi-Mir-12_5p
mirBase accessionMIMAT0008852
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
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Star sequence

Dsi-Mir-12_3p*
mirBase accessionNone
Sequence 
42- CAGUACUUGUGUCAUACUACGC -64
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