MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-12-P4

Family name MIR-12 (all species)
Seed GAGUAUU
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-12-P3 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) L. anatina
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01000141: 488714-488773 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGUAUAAAAAGUAUGAGAAUGUCAUCCUUGAGUAUUACAUCAGGUACUGAUGGUGUAUCUCAACUCAGUGCCUUGUGUGAUAUUCUUGGGUUACUGCUCAUUUCAACACUAGCUGGUU
Get precursor sequence
Structure
        10         20         30        40        50         
CCAGUAUAAAAAGUAUGA-  AU-| C    UU           C         UGGUGU 
                   GA   GU AUCC  GAGUAUUACAU AGGUACUGA      A
                   CU   CA UGGG  CUUAUAGUGUG UCCGUGACU      U
UUGGUCGAUCACAACUUUA  CGU^ U    UU           U         CAACUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To To
Mature sequence

Lan-Mir-12-P4_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGA -22
Get sequence
Star sequence

Lan-Mir-12-P4_3p*
mirBase accessionNone
Sequence 
38- AGUGCCUUGUGUGAUAUUCUUG -60
Get sequence