MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pca-Mir-12-P12  Pca-Mir-12-P13  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Snu-Mir-12  Tca-Mir-12  Tur-Mir-12-P14  Tur-Mir-12-P15  War-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Bpl_ASM1027981)		 QEOQ01000141.1: 556006-556066 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUACACACAGCAAAAAGCGAGAUACAUUGAGUAUUACAUCAGGUAUUGAAUGGUUUUUCAAUUUUCAGUAUCUAUGUAAAUACUCACUCUACCUGCUUUUAGACAUUUCAUCUAAAAA
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Structure
        10           20        30         40        50          
UUUUUACACACAGCAAA---|   G  A  CAU        -    C          UGGUUU 
                    AAGC AG UA   UGAGUAUU ACAU AGGUAUUGAA      \
                    UUCG UC AU   ACUCAUAA UGUA UCUAUGACUU      U
AAAAAUCUACUUUACAGAUU^   -  C  CUC        A    -          UUAACU 
 .       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Bpl-Mir-12_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUAUUGAA -23
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Star sequence

Bpl-Mir-12_3p* (predicted)
mirBase accessionNone
Sequence 
38- CAGUAUCUAUGUAAAUACUCACU -61
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