MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lhy-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pca-Mir-12-P12  Pca-Mir-12-P13  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Snu-Mir-12  Tca-Mir-12  Tur-Mir-12-P14  Tur-Mir-12-P15  War-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_910592395.2_tnLinLong1)		 OU342994.1: 2295834-2295889 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUACCCAUUCCUGGAGAACUUCUAAGUUUUGAGUAUUACAUCAGGUACUGAGUCAGAGAGUUCAGUACCUUCUGUGAUAUUCAUAAUUUGGAAGUGAGAGGCACCAGGAAUGUCU
Get precursor sequence
Structure
        10          20        30        40        50       
AAUACCCAUUCCUGGAGA--|          U           UC         GUCA 
                    ACUUCUAAGUU UGAGUAUUACA  AGGUACUGA    G
                    UGAAGGUUUAA ACUUAUAGUGU  UCCAUGACU    A
UCUGUAAGGACCACGGAGAG^          U           CU         UGAG 
    110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
No No No No No No
Mature sequence

Llo-Mir-12_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGA -22
Get sequence
Star sequence

Llo-Mir-12_3p*
mirBase accessionNone
Sequence 
34- AGUACCUUCUGUGAUAUUCAUA -56
Get sequence