MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-12-P14

Family name MIR-12 (all species)
Seed GAGUAUU
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-12a
Paralogues Tur-Mir-12-P15 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) T. urticae
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587328.1: 1008240-1008300 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGAUUCAAUUUCAUCAAGUGUGAUUGCCUGUGAGUAUUACAUCAGGUACUGGUUGAUUAGAUUUAAUCCAGUACUUAAUGUGAGACUCAUCGACAGUUACACUCAAUCGUCUUAAAUGGUC
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Structure
        10          20        30        40        50          
GGAUUCAAUUUCAUCAA--|        CCU      A      C         UUGAUUA 
                   GUGUGAUUG   GUGAGU UUACAU AGGUACUGG       \
                   CACAUUGAC   UACUCA AGUGUA UUCAUGACC       G
CUGGUAAAUUCUGCUAACU^        AGC      G      A         UAAUUUA 
 .       110       100        90        80        70
Deep sequencing
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CommentThere are Dicer cuts -1 and -2 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr
Mature sequence

Tur-Mir-12-P14_5p
mirBase accessionMIMAT0023102
Sequence 
0- UGAGUAUUACAUCAGGUACUGG -22
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Star sequence

Tur-Mir-12-P14_3p*
mirBase accessionMIMAT0023103
Sequence 
39- AGUACUUAAUGUGAGACUCAUC -61
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