MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-12
Paralogues
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pca-Mir-12-P12  Pca-Mir-12-P13  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Snu-Mir-12  Tca-Mir-12  Tur-Mir-12-P14  Tur-Mir-12-P15  War-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Drosophila_melanogaster_BDGP6)		 X: 15509479-15509542 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12)		 Mir-216-P1 X: 15507976-15508044 [+] UCSC Ensembl
Mir-216-P2 X: 15508970-15509037 [+] UCSC Ensembl
Mir-12 X: 15509479-15509542 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCUGUACGAAGGAGCAGCGUCUGUACGGUUGAGUAUUACAUCAGGUACUGGUGUGCCUUAAAUCCAACAACCAGUACUUAUGUCAUACUACGCCGUGCACGGAUCGCACUAACCGCAUGACCA
Get precursor sequence
Structure
        10            20        30        40        50        60  
GUCUGUACGAAGGAGCAG----|  CU       UG     U    C          GUGCCUUA 
                      CGU  GUACGGU  AGUAU ACAU AGGUACUGGU        \
                      GCA  CGUGCCG  UCAUA UGUA UUCAUGACCA        A
ACCAGUACGCCAAUCACGCUAG^  --       CA     C    -          ACAACCUA 
  120       110       100          90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-12_5p
mirBase accessionMIMAT0000117
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
Get sequence
Proposed targets microrna.org: MIMAT0000117
Star sequence

Dme-Mir-12_3p*
mirBase accessionMIMAT0020794
Sequence 
42- CAGUACUUAUGUCAUACUACGC -64
Get sequence