MirGeneDB 2.1

MirGeneDB ID

Npo-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Bge-Mir-12  Bpl-Mir-12  Cgi-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Esc-Mir-12  Hme-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Ovu-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Tca-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_018389105_NPO)
JACATO010001670.1: 34868-34925 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCCAUCUGCUGACUGUGGUCUACAACCUGUGAGUAUUACAUCAGGUACUGAUAAUUUAUCCAAUCAGUACCUUUUGUGAUAUUCGUAGCUUGUACAUCCUUUCCAACUUGUUUGUUU
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Structure
        10         20         30        40        50        
AUCCAUCUGCUGACUGU-  UC-|    C              UC         UAAUU 
                  GG   UACAA CUGUGAGUAUUACA  AGGUACUGA     U
                  CC   AUGUU GAUGCUUAUAGUGU  UCCAUGACU     A
UUUGUUUGUUCAACCUUU  UAC^    C              UU         AACCU 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Mature sequence

Npo-Mir-12_5p (predicted)

mirBase accessionNone
Sequence
0- UGAGUAUUACAUCAGGUACUGA -22
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Star sequence

Npo-Mir-12_3p* (predicted)

mirBase accessionNone
Sequence
36- AGUACCUUUUGUGAUAUUCGUA -58
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