MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-12-P13

Family name MIR-12 (all species)
Seed GAGUAUU
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-12-P12 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715627.1: 148169-148228 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGAAACCUGACGAGAGGUUCAGACCGCUUGAGUAUUACAUCAGGUACUGAUGUAUGUCUGCGGCUCAGUACCUCUUGUGCUGCUCGGGUGGAAUGAAUUCUGGCGGCAUUACGGCAUC
Get precursor sequence
Structure
        10          20        30        40        50         
CAUGAAACCUGACGAGA--|     GA           U    UC         UGUAUG 
                   GGUUCA  CCGCUUGAGUA UACA  AGGUACUGA      U
                   UUAAGU  GGUGGGCUCGU GUGU  UCCAUGACU      C
CUACGGCAUUACGGCGGUC^     AA           C    UC         CGGCGU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Gi In To
Mature sequence

Pca-Mir-12-P13_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGA -22
Get sequence
Star sequence

Pca-Mir-12-P13_3p*
mirBase accessionNone
Sequence 
38- AGUACCUCUUGUGCUGCUCGGG -60
Get sequence