MirGeneDB 3.0

41 microRNA genes with node of origin P. caudatus
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Pca-Mir-2-o139 None MIR-2 AUCACAG None None KQ715494.1 124532 124588 - P. caudatus Protostomia No 1
Pca-Mir-2-o140 None MIR-2 AUCACAG None None KQ715494.1 124356 124415 - P. caudatus Protostomia No 1 1
Pca-Mir-2-o141 None MIR-2 AUCACAG None None KQ715494.1 124073 124133 - P. caudatus Protostomia No 1
Pca-Mir-2-o142 None MIR-2 AUCACAG None None KQ715271.1 34836 34894 - P. caudatus Protostomia No 1
Pca-Mir-2-o143 None MIR-2 AUCACAG None None KQ715271.1 34696 34756 - P. caudatus Protostomia No 1
Pca-Mir-2-o144 None MIR-2 AUCACAG None None KQ715271.1 34504 34565 - P. caudatus Protostomia No 1
Pca-Mir-2-o145 None MIR-2 AUCACAG None None KQ715271.1 32509 32573 - P. caudatus Protostomia No 1
Pca-Mir-2-o146 None MIR-2 AUCACAG None None KQ715780.1 17587 17642 + P. caudatus Protostomia No 1 1
Pca-Mir-2-o147 None MIR-2 AUCACAG None None KQ715780.1 17758 17818 + P. caudatus Protostomia No 1
Pca-Mir-2-o148 None MIR-2 AUCACAG None None KQ715780.1 18746 18808 + P. caudatus Protostomia No 1
Pca-Mir-2-o149 None MIR-2 AUCACAG None None KQ716084.1 1768 1828 - P. caudatus Protostomia No 1 1
Pca-Mir-2-o150 None MIR-2 AUCACAG None None KQ716084.1 1503 1563 - P. caudatus Protostomia No 1 1
Pca-Mir-2-o151 None MIR-2 AUCACAG None None KQ716084.1 1255 1318 - P. caudatus Protostomia No 1
Pca-Mir-2-o152 None MIR-2 AUCACAG None None KQ716084.1 229 289 - P. caudatus Protostomia No 1
Pca-Mir-9-P31 None MIR-9 CUUUGGU None None KQ715418.1 82183 82242 + P. caudatus Bilateria No
Pca-Mir-9-P32 None MIR-9 CUUUGGU None None KQ715199.1 119342 119403 - P. caudatus Bilateria Unknown 1
Pca-Mir-12-P12 None MIR-12 GAGUAUU None None KQ715014.1 183644 183702 - P. caudatus Protostomia Unknown 1
Pca-Mir-12-P13 None MIR-12 GAGUAUU None None KQ715627.1 148169 148228 - P. caudatus Protostomia No 1 1
Pca-Mir-29-o6 None MIR-29 AGCACCA None None KQ717034.1 31025 31084 - P. caudatus Bilateria No 1
Pca-Mir-29-o7 None MIR-29 AGCACCA None None AXZU02088352.1 107 163 + P. caudatus Bilateria No
Pca-Mir-36-P23 None MIR-36 CACCGGG None None KQ715408.1 303049 303105 + P. caudatus Protostomia Unknown 1
Pca-Mir-36-P24 None MIR-36 CACCGGG None None KQ715408.1 303221 303277 + P. caudatus Protostomia Unknown 1 1
Pca-Mir-36-P25 None MIR-36 CACCGGG None None KQ715408.1 303392 303448 + P. caudatus Protostomia Unknown 1
Pca-Mir-87-o22 None MIR-87 UGAGCAA None None KQ715638.1 116649 116711 + P. caudatus Protostomia No 1
Pca-Mir-87-o23 None MIR-87 UGAGCAA None None KQ715148.1 408163 408224 + P. caudatus Protostomia No 1
Pca-Mir-92-o96 None MIR-92 AUUGCAC None None KQ716014.1 7152 7210 - P. caudatus Bilateria No 1
Pca-Mir-92-o97 None MIR-92 AUUGCAC None None KQ716181.1 38405 38465 - P. caudatus Bilateria No 1 1
Pca-Mir-184-P30 None MIR-184 GGACGGA None None KQ714999.1 319378 319436 - P. caudatus Nephrozoa No 1
Pca-Mir-184-P31 None MIR-184 GGACGGA None None KQ715149.1 25336 25394 - P. caudatus Nephrozoa No 1
Pca-Mir-279-o27 None MIR-279 GACUAGA None None KQ715408.1 301499 301556 + P. caudatus Protostomia No
Pca-Mir-279-o28 None MIR-279 GACUAGA None None KQ716035.1 12684 12743 + P. caudatus Protostomia No 1
Pca-Mir-279-o29 None MIR-279 GACUAGA None None KQ716014.1 17538 17596 - P. caudatus Protostomia Yes 1 1
Pca-Mir-279-o30 None MIR-279 GACUAGA None None KQ716014.1 16868 16927 - P. caudatus Protostomia No
Pca-Mir-279-o31 None MIR-279 GACUAGA None None KQ716181.1 67909 67966 - P. caudatus Protostomia No
Pca-Mir-279-o32 None MIR-279 GACUAGA None None KQ716181.1 67725 67783 - P. caudatus Protostomia Yes 1 1
Pca-Mir-279-o33 None MIR-279 GACUAGA None None KQ716181.1 66996 67057 - P. caudatus Protostomia No 1
Pca-Novel-1 None PCA-NOVEL-1 AGGCCAU None None KQ714938.1 413106 413164 + P. caudatus P. caudatus No 1
Pca-Novel-2 None PCA-NOVEL-2 CUAGCAU None None KQ715891.1 63716 63775 - P. caudatus P. caudatus No 1 1
Pca-Novel-3-P2 None PCA-NOVEL-3 CUUUCUC None None KQ715186.1 93118 93177 + P. caudatus P. caudatus No 1
Pca-Novel-4 None PCA-NOVEL-4 UGGCGUU None None KQ715038.1 626891 626950 + P. caudatus P. caudatus No 1
Pca-Novel-5 None PCA-NOVEL-5 UUGAAAG None None KQ715186.1 171157 171217 - P. caudatus P. caudatus No 1

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