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41 microRNA genes with node of origin P. caudatus
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Pca-Mir-2-o139
None
MIR-2
AUCACAG
None
None
KQ715494.1
124532
124588
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o140
None
MIR-2
AUCACAG
None
None
KQ715494.1
124356
124415
-
P. caudatus
Protostomia
No
1
1
Pca-Mir-2-o141
None
MIR-2
AUCACAG
None
None
KQ715494.1
124073
124133
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o142
None
MIR-2
AUCACAG
None
None
KQ715271.1
34836
34894
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o143
None
MIR-2
AUCACAG
None
None
KQ715271.1
34696
34756
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o144
None
MIR-2
AUCACAG
None
None
KQ715271.1
34504
34565
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o145
None
MIR-2
AUCACAG
None
None
KQ715271.1
32509
32573
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o146
None
MIR-2
AUCACAG
None
None
KQ715780.1
17587
17642
+
P. caudatus
Protostomia
No
1
1
Pca-Mir-2-o147
None
MIR-2
AUCACAG
None
None
KQ715780.1
17758
17818
+
P. caudatus
Protostomia
No
1
Pca-Mir-2-o148
None
MIR-2
AUCACAG
None
None
KQ715780.1
18746
18808
+
P. caudatus
Protostomia
No
1
Pca-Mir-2-o149
None
MIR-2
AUCACAG
None
None
KQ716084.1
1768
1828
-
P. caudatus
Protostomia
No
1
1
Pca-Mir-2-o150
None
MIR-2
AUCACAG
None
None
KQ716084.1
1503
1563
-
P. caudatus
Protostomia
No
1
1
Pca-Mir-2-o151
None
MIR-2
AUCACAG
None
None
KQ716084.1
1255
1318
-
P. caudatus
Protostomia
No
1
Pca-Mir-2-o152
None
MIR-2
AUCACAG
None
None
KQ716084.1
229
289
-
P. caudatus
Protostomia
No
1
Pca-Mir-9-P31
None
MIR-9
CUUUGGU
None
None
KQ715418.1
82183
82242
+
P. caudatus
Bilateria
No
Pca-Mir-9-P32
None
MIR-9
CUUUGGU
None
None
KQ715199.1
119342
119403
-
P. caudatus
Bilateria
Unknown
1
Pca-Mir-12-P12
None
MIR-12
GAGUAUU
None
None
KQ715014.1
183644
183702
-
P. caudatus
Protostomia
Unknown
1
Pca-Mir-12-P13
None
MIR-12
GAGUAUU
None
None
KQ715627.1
148169
148228
-
P. caudatus
Protostomia
No
1
1
Pca-Mir-29-o6
None
MIR-29
AGCACCA
None
None
KQ717034.1
31025
31084
-
P. caudatus
Bilateria
No
1
Pca-Mir-29-o7
None
MIR-29
AGCACCA
None
None
AXZU02088352.1
107
163
+
P. caudatus
Bilateria
No
Pca-Mir-36-P23
None
MIR-36
CACCGGG
None
None
KQ715408.1
303049
303105
+
P. caudatus
Protostomia
Unknown
1
Pca-Mir-36-P24
None
MIR-36
CACCGGG
None
None
KQ715408.1
303221
303277
+
P. caudatus
Protostomia
Unknown
1
1
Pca-Mir-36-P25
None
MIR-36
CACCGGG
None
None
KQ715408.1
303392
303448
+
P. caudatus
Protostomia
Unknown
1
Pca-Mir-87-o22
None
MIR-87
UGAGCAA
None
None
KQ715638.1
116649
116711
+
P. caudatus
Protostomia
No
1
Pca-Mir-87-o23
None
MIR-87
UGAGCAA
None
None
KQ715148.1
408163
408224
+
P. caudatus
Protostomia
No
1
Pca-Mir-92-o96
None
MIR-92
AUUGCAC
None
None
KQ716014.1
7152
7210
-
P. caudatus
Bilateria
No
1
Pca-Mir-92-o97
None
MIR-92
AUUGCAC
None
None
KQ716181.1
38405
38465
-
P. caudatus
Bilateria
No
1
1
Pca-Mir-184-P30
None
MIR-184
GGACGGA
None
None
KQ714999.1
319378
319436
-
P. caudatus
Nephrozoa
No
1
Pca-Mir-184-P31
None
MIR-184
GGACGGA
None
None
KQ715149.1
25336
25394
-
P. caudatus
Nephrozoa
No
1
Pca-Mir-279-o27
None
MIR-279
GACUAGA
None
None
KQ715408.1
301499
301556
+
P. caudatus
Protostomia
No
Pca-Mir-279-o28
None
MIR-279
GACUAGA
None
None
KQ716035.1
12684
12743
+
P. caudatus
Protostomia
No
1
Pca-Mir-279-o29
None
MIR-279
GACUAGA
None
None
KQ716014.1
17538
17596
-
P. caudatus
Protostomia
Yes
1
1
Pca-Mir-279-o30
None
MIR-279
GACUAGA
None
None
KQ716014.1
16868
16927
-
P. caudatus
Protostomia
No
Pca-Mir-279-o31
None
MIR-279
GACUAGA
None
None
KQ716181.1
67909
67966
-
P. caudatus
Protostomia
No
Pca-Mir-279-o32
None
MIR-279
GACUAGA
None
None
KQ716181.1
67725
67783
-
P. caudatus
Protostomia
Yes
1
1
Pca-Mir-279-o33
None
MIR-279
GACUAGA
None
None
KQ716181.1
66996
67057
-
P. caudatus
Protostomia
No
1
Pca-Novel-1
None
PCA-NOVEL-1
AGGCCAU
None
None
KQ714938.1
413106
413164
+
P. caudatus
P. caudatus
No
1
Pca-Novel-2
None
PCA-NOVEL-2
CUAGCAU
None
None
KQ715891.1
63716
63775
-
P. caudatus
P. caudatus
No
1
1
Pca-Novel-3-P2
None
PCA-NOVEL-3
CUUUCUC
None
None
KQ715186.1
93118
93177
+
P. caudatus
P. caudatus
No
1
Pca-Novel-4
None
PCA-NOVEL-4
UGGCGUU
None
None
KQ715038.1
626891
626950
+
P. caudatus
P. caudatus
No
1
Pca-Novel-5
None
PCA-NOVEL-5
UUGAAAG
None
None
KQ715186.1
171157
171217
-
P. caudatus
P. caudatus
No
1
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