MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-9-P31

Family name MIR-9 (all species)
Seed CUUUGGU
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-9-P32 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) P. caudatus
Node of Origin (family) Bilateria
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715418.1: 82183-82242 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGCACCUGCACUGAGGCUCCGAUGUUUUCUUUGGUUAUCUAGCUGUAUGAGUAAGUUCUACGUCAUAAAGCUAGGUUACCAAAGGUACAAGCGGUCGCCAAGUUACGCCAAUACCUC
Get precursor sequence
Structure
        10         20          30        40        50         
UGCUGCACCUGCACUGA-   U-   A-|  UU        U        G    AGUAAG 
                  GGC  CCG  UGU  UCUUUGGU AUCUAGCU UAUG      U
                  CCG  GGC  ACA  GGAAACCA UGGAUCGA AUAC      U
CUCCAUAACCGCAUUGAA   CU   GA^  U-        U        A    UGCAUC 
.       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Gi In To
Mature sequence

Pca-Mir-9-P31_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUG -22
Get sequence
Co-mature sequence

Pca-Mir-9-P31_3p
mirBase accessionNone
Sequence 
38- UAAAGCUAGGUUACCAAAGGUA -60
Get sequence