MirGeneDB 3.0

MirGeneDB ID

Pca-Mir-29-o7

Family name MIR-29 (all species)
Seed AGCACCA
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-29-o6 
Orthologues Gsp-Mir-29 
Node of Origin (locus) P. caudatus
Node of Origin (family) Bilateria
Genome context
(Priapulus_caudatus_gca000485595v2)
AXZU02088352.1: 107-163 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGGAACCGUCGUGGAAACAUUGUUCAGGACUGAAUUCAUGUGGAGCAAAGGUCGCCCUAAUUCUAGCACCAUUUGAAUUCAGUUUUGUAUUCAGUGUCUUGUGCAGCAGAAGAUG
Get precursor sequence
Structure
        10        20          30        40        50        
GGGGGAACCGUCGUGGAA      UU--|             U    A  AA   UCGC 
                  ACAUUG    CAGGACUGAAUUCA GUGG GC  AGG    C
                  UGUGAC    GUUUUGACUUAAGU UACC CG  UCU    C
GUAGAAGACGACGUGUUC      UUAU^             U    A  A-   UAAU 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Gi In To
Star sequence

Pca-Mir-29-o7_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUGAAUUCAUGUGGAGCAAAGG -23
Get sequence
Mature sequence

Pca-Mir-29-o7_3p

mirBase accessionNone
Sequence
35- UAGCACCAUUUGAAUUCAGUUU -57
Get sequence