MirGeneDB 3.0

MirGeneDB ID

Pca-Mir-29-o6

Family name MIR-29 (all species)
Seed AGCACCA
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-29-o7 
Orthologues Gsp-Mir-29 
Node of Origin (locus) P. caudatus
Node of Origin (family) Bilateria
Genome context
(Priapulus_caudatus_gca000485595v2)
KQ717034.1: 31025-31084 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCACCUACGAUUCUAGGCACCGCUGAGGCCUGGUAUCAAAUGGUGGAUAGAUGCUCACAAAUGUUCUAGCACCAUUUGAAAUCAGUGCCGCCGCGGUCGCCAUGGCAACAGUGAUGAC
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Structure
        10        20         30         40        50          
UUUCACCUACGAUUCUAG  -     UGA   -|    A          GA    UGCUCA 
                  GC ACCGC   GGC CUGGU UCAAAUGGUG  UAGA      \
                  CG UGGCG   CCG GACUA AGUUUACCAC  AUCU      C
CAGUAGUGACAACGGUAC  C     CCG   U^    A          G-    UGUAAA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Gi In To
Star sequence

Pca-Mir-29-o6_5p* (predicted)

mirBase accessionNone
Sequence
0- CCUGGUAUCAAAUGGUGGAUAGA -23
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Mature sequence

Pca-Mir-29-o6_3p

mirBase accessionNone
Sequence
38- UAGCACCAUUUGAAAUCAGUGC -60
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