MirGeneDB 3.0

MirGeneDB ID

Pca-Novel-3-P2

Family name PCA-NOVEL-3 (all species)
Seed CUUUCUC
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) P. caudatus
Node of Origin (family) P. caudatus
Genome context
(Priapulus_caudatus_gca000485595v2)
KQ715186.1: 93118-93177 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACCACAGAGCUGUAUUCGGUCGCGUGGUUACUUUCUCGGGAGUUUGUUGUGUCCUGUUUACACCACCACAACCUCCCAUGAGGAAGCGGCUAUCGGCCACACUAUCAGCUGCACGCACG
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Structure
        10           20        30          40        50        
AACCACAGAGCUGUAUUC---     C     UA       --|    U    U   UCCUG 
                     GGUCG GUGGU  CUUUCUC  GGGAG UUGU GUG     U
                     CCGGC UAUCG  GAAGGAG  CCCUC AACA CAC     U
GCACGCACGUCGACUAUCACA     -     GC       UA^    C    C   CACAU 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Gi In To
Mature sequence

Pca-Novel-3-P2_5p

mirBase accessionNone
Sequence
0- ACUUUCUCGGGAGUUUGUUGUG -22
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Star sequence

Pca-Novel-3-P2_3p*

mirBase accessionNone
Sequence
36- CCACAACCUCCCAUGAGGAAGCGG -60
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