| MirGeneDB ID | Pca-Novel-3-P2 |
|---|
| Family name |
PCA-NOVEL-3 (all species) |
|---|
| Seed |
CUUUCUC |
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| Species |
Penis worm (Priapulus caudatus) |
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| MiRBase ID |
|
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| Paralogues |
Pca-Novel-3-P1
|
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| Orthologues |
|
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| Node of Origin (locus) |
P. caudatus
|
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| Node of Origin (family) |
P. caudatus
|
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Genome context
(Priapulus_caudatus_gca000485595v2) |
KQ715186.1: 93118-93177 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AACCACAGAGCUGUAUUCGGUCGCGUGGUUACUUUCUCGGGAGUUUGUUGUGUCCUGUUUACACCACCACAACCUCCCAUGAGGAAGCGGCUAUCGGCCACACUAUCAGCUGCACGCACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACCACAGAGCUGUAUUC--- C UA --| U U UCCUG
GGUCG GUGGU CUUUCUC GGGAG UUGU GUG U
CCGGC UAUCG GAAGGAG CCCUC AACA CAC U
GCACGCACGUCGACUAUCACA - GC UA^ C C CACAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Pca-Novel-3-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACUUUCUCGGGAGUUUGUUGUG -22
Get sequence
|
|---|
| Star sequence |
Pca-Novel-3-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CCACAACCUCCCAUGAGGAAGCGG -60
Get sequence
|
|---|
