MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o142

Family name MIR-2 (all species)
Seed AUCACAG
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o140  Pca-Mir-2-o141  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Gsp-Mir-2  Ple-Mir-2  Tur-Mir-2-o142a  Tur-Mir-2-o142b 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715271.1: 34836-34894 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUGAUGAAGCAUGAACUCCUACACUUGUGUGGCCAGAGCGUCUGUGAUUUGUCAUGUUUGCUCAUAUCACAGGCCCUUUGGUGAUGCUGGUGAUGGGGAAACCCACCGUGAAUUUAU
Get precursor sequence
Structure
        10          20        30        40        50         
GACUGAUGAAGCAUGAA--|   UA    U    G       C         U  UCAUG 
                   CUCC  CACU GUGU GCCAGAG GUCUGUGAU UG     \
                   GGGG  GUGG CGUA UGGUUUC CGGACACUA AC     U
UAUUUAAGUGCCACCCAAA^   UA    U    G       C         U  UCGUU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Gi In To
Star sequence

Pca-Mir-2-o142_5p*
mirBase accessionNone
Sequence 
0- GUGGCCAGAGCGUCUGUGAUUUG -23
Get sequence
Mature sequence

Pca-Mir-2-o142_3p
mirBase accessionNone
Sequence 
36- UAUCACAGGCCCUUUGGUGAUGC -59
Get sequence