MirGeneDB 3.0

MirGeneDB ID

Pca-Mir-2-o146

Family name MIR-2 (all species)
Seed AUCACAG
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o140  Pca-Mir-2-o141  Pca-Mir-2-o142  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)
KQ715780.1: 17587-17642 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCGAGGGAUGAGGAUGCUUGGACGCGAGCCGUCAAAGUGGCUGUGAAAUGUUCCGAUGUCAUAUCACAGCCAGCUUUGAUGAGUCGCUGCCUGGGCGAGGCAACGUGAAGCCGU
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Structure
        10         20         30         40        50       
CAGCGAGGGAUGAGGAU-   UG A -    GC        -|        A   UUCC 
                  GCU  G C GCGA  CGUCAAAG UGGCUGUGA AUG    \
                  CGG  C G CGCU  GUAGUUUC ACCGACACU UAC    G
UGCCGAAGUGCAACGGAG   GU C U    GA        G^        A   UGUA 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Gi In To
Star sequence

Pca-Mir-2-o146_5p* (predicted)

mirBase accessionNone
Sequence
0- CCGUCAAAGUGGCUGUGAAAUG -22
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Mature sequence

Pca-Mir-2-o146_3p

mirBase accessionNone
Sequence
33- UAUCACAGCCAGCUUUGAUGAGU -56
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