MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pca-Mir-12-P12  Pca-Mir-12-P13  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Snu-Mir-12  Tca-Mir-12  Tur-Mir-12-P14  Tur-Mir-12-P15  War-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075497.1: 11031363-11031424 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUUUAAACAUAUGAAGUGGUCUUUGAUUUGAGUAUUGCACUUGGUAUUGGCUUGAAUAUUCAAUUGACAAUGCCGGUUGAAAUACUCUCAUCACACCAUAAUAUUGUCUAUUUAUUGUUU
Get precursor sequence
Structure
        10            20        30        40        50        60
UCAUUUAAACAUAUGAA----|    CUU    UU       G  C         GCUUGAAU 
                     GUGGU   UGAU  GAGUAUU CA UUGGUAUUG        A
                     UACCA   ACUA  CUCAUAA GU GGCCGUAAC        U
UUUGUUAUUUAUCUGUUAUAA^    C--    CU       A  U         AGUUAACU 
120       110       100          90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Sr Sr
Mature sequence

Ava-Mir-12_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUGCACUUGGUAUUGGC -23
Get sequence
Star sequence

Ava-Mir-12_3p*
mirBase accessionNone
Sequence 
39- CAAUGCCGGUUGAAAUACUCUCA -62
Get sequence