MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-12-P2

Family name MIR-12 (all species)
Seed GAGUAUU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-12-P1 
Orthologues Aae-Mir-12  Aga-Mir-12  Agr-Mir-12  Ava-Mir-12  Bge-Mir-12  Bko-Mir-12  Bpl-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dgr-Mir-12  Dlo-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Eba-Mir-12  Egr-Mir-12  Esc-Mir-12  Gpa-Mir-12  Gsp-Mir-12  Hme-Mir-12  Hru-Mir-12  Isc-Mir-12  Lgi-Mir-12  Lhy-Mir-12  Llo-Mir-12  Mgi-Mir-12  Mom-Mir-12  Npo-Mir-12  Ofu-Mir-12  Ovu-Mir-12  Pau-Mir-12  Pcr-Mir-12  Pdu-Mir-12  Pve-Mir-12  Rph-Mir-12  Snu-Mir-12  Tca-Mir-12  War-Mir-12 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 scaffold9233-size18363: 16287-16347 [+]
Precursor
(pre-Mir +30nt flank)
GUUCUGCUCUUGUAGAUAUCUCACCGUGCAUGAGUAUUACUUCAGGUACUGAGUUCAGUUUGCUGCUUCAGUAUCUGCUGUGCUAUUCGUGUAUGGUGGAUGGUUGUUCGACUUCUACUCA
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Structure
        10           20        30        40        50          
GUUCUGCUCUUGUAGAU---|  U               U   UU          GUUCAGU 
                    AUC CACCGUGCAUGAGUA UAC  CAGGUACUGA       \
                    UAG GUGGUAUGUGCUUAU GUG  GUCUAUGACU       U
ACUCAUCUUCAGCUUGUUGG^  -               C   UC          UCGUCGU 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Efe-Mir-12-P2_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACUUCAGGUACUGA -22
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Star sequence

Efe-Mir-12-P2_3p*
mirBase accessionNone
Sequence 
39- AGUAUCUGCUGUGCUAUUCGUG -61
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