MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-5305-P5

Family name MIR-5305 (all species)
Seed UGGGCUU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-5305-P1  Lpo-Mir-5305-P2  Lpo-Mir-5305-P3  Lpo-Mir-5305-P4  Lpo-Mir-5305-P6  Lpo-Mir-5305-P7  Lpo-Mir-5305-P8 
Orthologues Isc-Mir-5305 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Chelicerata
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013675887.1: 22223-22282 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCAGAAGAUUAGCCCAUUUAGUGGGCUCUAAGUUAAUCUCCAAGUCUAAUGGUUGAAUUCGUUAAUUGGGCUUGAAGAUUAACUUAGACCCCGCUAAAUACAUCACACGAAGAAACAA
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Structure
        10          20        30        40        50         
GAUCAGAAGAUUAGCCC--|         C             C          GGUUGA 
                   AUUUAGUGGG UCUAAGUUAAUCU CAAGUCUAAU      A
                   UAAAUCGCCC AGAUUCAAUUAGA GUUCGGGUUA      U
AACAAAGAAGCACACUACA^         C             A          AUUGCU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-5305-P5_5p*
mirBase accessionNone
Sequence 
0- UAAGUUAAUCUCCAAGUCUAAUG -23
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Mature sequence

Lpo-Mir-5305-P5_3p
mirBase accessionNone
Sequence 
37- UUGGGCUUGAAGAUUAACUUAGA -60
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