MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-5305-P4

Family name MIR-5305 (all species)
Seed UGGGCUU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-5305-P1  Lpo-Mir-5305-P2  Lpo-Mir-5305-P3  Lpo-Mir-5305-P5  Lpo-Mir-5305-P6  Lpo-Mir-5305-P7  Lpo-Mir-5305-P8 
Orthologues Isc-Mir-5305 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Chelicerata
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667435.1: 213057-213116 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAAAGGUCACAUCCACAUUUAGCGGACUCUAAGUUAAUCUCCAAGCCCAAUAGCUAGUUUAGUCAGUUGGGCUUGAAGAUUAACUUAGACCCCGCUAAAUACAUCACACUGACUCGCCG
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Structure
        10          20        30        40        50         
AUAAAGGUCACAUCCAC--|        AC             C          AGCUAG 
                   AUUUAGCGG  UCUAAGUUAAUCU CAAGCCCAAU      U
                   UAAAUCGCC  AGAUUCAAUUAGA GUUCGGGUUG      U
GCCGCUCAGUCACACUACA^        CC             A          ACUGAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-5305-P4_5p*
mirBase accessionNone
Sequence 
0- UAAGUUAAUCUCCAAGCCCAAUA -23
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Mature sequence

Lpo-Mir-5305-P4_3p
mirBase accessionNone
Sequence 
37- UUGGGCUUGAAGAUUAACUUAGA -60
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