MirGeneDB 3.0
MirGeneDB ID

Isc-Mir-5305

Family name MIR-5305 (all species)
Seed GGGCUUG
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-5305
Paralogues
Orthologues Csc-Mir-5305-P9a  Csc-Mir-5305-P9b  Csc-Mir-5305-P10  Lpo-Mir-5305-P1  Lpo-Mir-5305-P2  Lpo-Mir-5305-P3  Lpo-Mir-5305-P4  Lpo-Mir-5305-P5  Lpo-Mir-5305-P6  Lpo-Mir-5305-P7  Lpo-Mir-5305-P8 
Node of Origin (locus) Chelicerata
Node of Origin (family) Chelicerata
Genome context
(GCF_016920785.2_ASM1692078v2_ISC)		 NW_024609838.1: 87221059-87221118 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACCUCAGACGGCGGGCAUUUGGCGGACUCUAAGUUAAUCUCCAAGCCCAAUGGUAAUUCUCGUCAAUUGGGCUUGAAGAUUAGCUUAGACCCCGCCAAAUACAUCACACGUCCCGGUCU
Get precursor sequence
Structure
        10          20        30        40        50         
UACCUCAGACGGCGGGC--|        AC             C          GGUAAU 
                   AUUUGGCGG  UCUAAGUUAAUCU CAAGCCCAAU      U
                   UAAACCGCC  AGAUUCGAUUAGA GUUCGGGUUA      C
UCUGGCCCUGCACACUACA^        CC             A          ACUGCU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Sa Sa To
Star sequence

Isc-Mir-5305_5p*
mirBase accessionNone
Sequence 
0- UAAGUUAAUCUCCAAGCCCAAU -22
Get sequence
Mature sequence

Isc-Mir-5305_3p
mirBase accessionMIMAT0021375
Sequence 
38- UGGGCUUGAAGAUUAGCUUAGA -60
Get sequence