| MirGeneDB ID | Csc-Mir-5305-P10 |
|---|
| Family name |
MIR-5305 (all species) |
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| Seed |
UGGGCUU |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
Csc-Mir-5305-P9a
Csc-Mir-5305-P9b
|
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| Orthologues |
Isc-Mir-5305
|
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| Node of Origin (locus) |
C. sculpturatus
|
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| Node of Origin (family) |
Chelicerata
|
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Genome context
(GCF_000671375.1_CSC) |
NW_019384372.1: 165279-165338 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGAAGAAAAAAAAGUCAUUUGGCGGACUCCAAGUUAAUCUCCAAGCCCAGUGGUUAGAUGGUUAAAUUGGGCUUGAAGAUUAAUUUAGACCCCGCUAAAUACGUCAUACAACUAAGAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGAAGAAAAAAAAGUC--| AC C C GGUUAG
AUUUGGCGG UC AAGUUAAUCU CAAGCCCAGU A
UAAAUCGCC AG UUUAAUUAGA GUUCGGGUUA U
GAAGAAUCAACAUACUGCA^ CC A A AAUUGG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Csc-Mir-5305-P10_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAAGUUAAUCUCCAAGCCCAGUG -23
Get sequence
|
|---|
| Mature sequence |
Csc-Mir-5305-P10_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUGGGCUUGAAGAUUAAUUUAGA -60
Get sequence
|
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