MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-315-P4

Family name MIR-315 (all species)
Seed UUUGAUU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-315-P3  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Lpo-Mir-315-P6-v2 
Orthologues Aae-Mir-315  Aga-Mir-315  Agr-Mir-315  Bge-Mir-315  Bko-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dlo-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Eba-Mir-315  Efe-Mir-315  Esc-Mir-315  Gpa-Mir-315  Gsp-Mir-315  Hru-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lhy-Mir-315  Llo-Mir-315  Mom-Mir-315  Nag-Mir-315  Npo-Mir-315  Obi-Mir-315  Ofu-Mir-315  Ovu-Mir-315  Pau-Mir-315  Pca-Mir-315  Pcr-Mir-315  Pdu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Pve-Mir-315  Rph-Mir-315  Sko-Mir-315  Sme-Mir-315  Sne-Mir-315  Snu-Mir-315  Tca-Mir-315  Tur-Mir-315  War-Mir-315 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013677027.1: 9820-9877 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGCUAUUAUUGUUAUUUGUCUUCUCGCCUUUUGAUUGUUGCUCAGAAGGCGUGGACUUGACAGGCUUUCGAGCAGCGAUCAAACGCUGAGGAGAUCUGAUACCACAAGUUUAUCUC
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Structure
        10          20         30        40        50         
GAAGCUAUUAUUGUUAUUU--        -| CU              A      GUGGAC 
                     GUCUUCUC GC  UUUGAUUGUUGCUC GAAGGC      \
                     UAGAGGAG CG  AAACUAGCGACGAG CUUUCG      U
CUCUAUUUGAACACCAUAGUC        U^ C-              -      GACAGU 
      110       100        90         80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-315-P4_5p
mirBase accessionNone
Sequence 
0- UUUUGAUUGUUGCUCAGAAGGCG -23
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Star sequence

Lpo-Mir-315-P4_3p* (predicted)
mirBase accessionNone
Sequence 
36- CUUUCGAGCAGCGAUCAAACGC -58
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