MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-315

Family name MIR-315 (all species)
Seed UUUGAUU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-315
Paralogues
Orthologues Aae-Mir-315  Bge-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Cgi-Mir-315-v1  Cgi-Mir-315-v2  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Efe-Mir-315  Esc-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Lpo-Mir-315-P6-v2  Npo-Mir-315  Obi-Mir-315  Ovu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Sko-Mir-315  Sme-Mir-315 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LGX: 1327607-1327665 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAGACGACGAGCCUGCAGUUCCUUUUGCUUUUGAUUGUUGCUCAGAAAGCCGGGUGUUAGAAAGGCUUUCGGGCAAUAAUCAUUUCCAAAGAGGACUCGUCACAACUCGCUUCGUUU
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Structure
        10          20        30         40        50         
AGGAGACGACGAGCCUGC--|  U      GCUUU-            A       GGGUG 
                    AGU CCUUUU      UGAUUGUUGCUC GAAAGCC     U
                    UCA GGAGAA      ACUAAUAACGGG CUUUCGG     U
UUUGCUUCGCUCAACACUGC^  -      ACCUUU            -       AAAGA 
       110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-315_5p
mirBase accessionMIMAT0010096
Sequence 
0- UUUUGAUUGUUGCUCAGAAAGCC -23
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Star sequence

Tca-Mir-315_3p*
mirBase accessionNone
Sequence 
37- CUUUCGGGCAAUAAUCAUUUCC -59
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