Mir-315-P7

MirGeneDB ID

Ava-Mir-315-P7

Family name

MIR-315 (all species)

Seed

UUUGAUU

Species

Bdelloid rotifer (Adineta vaga)

MiRBase ID

Paralogues

Ava-Mir-315-P8

Orthologues

Aae-Mir-315 Aga-Mir-315 Agr-Mir-315 Bge-Mir-315 Bko-Mir-315 Bpl-Mir-315 Cbr-Mir-315 Cel-Mir-315 Csc-Mir-315 Cte-Mir-315 Dan-Mir-315 Dlo-Mir-315 Dma-Mir-315 Dme-Mir-315 Dmo-Mir-315 Dpu-Mir-315 Dsi-Mir-315 Dya-Mir-315 Eba-Mir-315 Efe-Mir-315 Esc-Mir-315 Gpa-Mir-315 Gsp-Mir-315 Hru-Mir-315 Isc-Mir-315 Lan-Mir-315 Lgi-Mir-315 Lhy-Mir-315 Llo-Mir-315 Mom-Mir-315 Nag-Mir-315 Npo-Mir-315 Obi-Mir-315 Ofu-Mir-315 Ovu-Mir-315 Pau-Mir-315 Pca-Mir-315 Pcr-Mir-315 Pdu-Mir-315 Pfl-Mir-315 Pma-Mir-315 Pve-Mir-315 Rph-Mir-315 Sko-Mir-315 Sme-Mir-315 Sne-Mir-315 Snu-Mir-315 Tca-Mir-315 Tur-Mir-315 War-Mir-315

Node of Origin (locus)

A. vaga

Node of Origin (family)

Nephrozoa

Genome context
(GCA_021613535.1_ASM2161353v1_AVA)

CP075492.1: 12371182-12371243 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

GUUCGACAAGACAAACAAACCGUCAUGACGUUUUGAUUGUUGCUCAGAGAGUCUGACAUUCUAUUAAUGACUCUGUGACAAUAGUCAAAAUCUUCUGCGGUUGAUAUUCAUCAAAUUCAGAU

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Structure

        10           20        30        40        50        60 
GUUCGACAAGACAAACA---|    U  U  C             C   G      UGACAUU 
                    AACCG CA GA GUUUUGAUUGUUG UCA AGAGUC       \
                    UUGGC GU UU UAAAACUGAUAAC AGU UCUCAG       C
UAGACUUAAACUACUUAUAG^    -  C  C             -   G      UAAUUAU 
120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To	To

Mature sequence

Ava-Mir-315-P7_5p

mirBase accession

None

Sequence

0- UUUUGAUUGUUGCUCAGAGAGUC -23

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Star sequence

Ava-Mir-315-P7_3p*

mirBase accession

None

Sequence

40- CUCUGUGACAAUAGUCAAAAUC -62

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