MirGeneDB ID | Obi-Mir-315 |
Family name |
MIR-315 (all species) |
Seed |
UUUGAUU |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-315
Bge-Mir-315
Bpl-Mir-315
Cbr-Mir-315
Cel-Mir-315
Cgi-Mir-315-v1
Cgi-Mir-315-v2
Csc-Mir-315
Cte-Mir-315
Dan-Mir-315
Dma-Mir-315
Dme-Mir-315
Dmo-Mir-315
Dpu-Mir-315
Dsi-Mir-315
Dya-Mir-315
Efe-Mir-315
Esc-Mir-315
Isc-Mir-315
Lan-Mir-315
Lgi-Mir-315
Lpo-Mir-315-P3
Lpo-Mir-315-P4
Lpo-Mir-315-P5
Lpo-Mir-315-P6-v1
Lpo-Mir-315-P6-v2
Npo-Mir-315
Ovu-Mir-315
Pfl-Mir-315
Pma-Mir-315
Sko-Mir-315
Sme-Mir-315
Tca-Mir-315
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Bilateria
|
Genome context (PRJNA270931_OBI) |
KQ423576: 23465-23524 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUAAGAAAUUAAACAAAAUGUCUACUCAUCUUUUGAUUGCUGCUCAGCAAGCACGGAAUAUUUGAAAGGUUGUCGAGUUGCAAUCAAAGACUGGUGAAGGCAAAAUAACAACAACAAAAG
Get precursor sequence
|
Structure | 10 20 30 40 50
AUAAGAAAUUAAACAAAA AC ---| U A GCACGGAAU
UGUCU UCAUC UUUUGAUUGC GCUC GCAA \
ACGGA AGUGG GAAACUAACG UGAG UGUU A
GAAAACAACAACAAUAAA -- UCA^ U C GGAAAGUUU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Obi-Mir-315_5p |
mirBase accession | None |
Sequence |
0- UUUUGAUUGCUGCUCAGCAAGC -22
Get sequence
|
Star sequence |
Obi-Mir-315_3p* |
mirBase accession | None |
Sequence |
39- UUGUCGAGUUGCAAUCAAAGA -60
Get sequence
|