Mir-315

MirGeneDB ID

Bge-Mir-315

Family name

MIR-315 (all species)

Seed

UUUGAUU

Species

Cockroach (Blattella germanica)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-315 Aga-Mir-315 Agr-Mir-315 Ava-Mir-315-P7 Ava-Mir-315-P8 Bko-Mir-315 Bpl-Mir-315 Cbr-Mir-315 Cel-Mir-315 Csc-Mir-315 Cte-Mir-315 Dan-Mir-315 Dgr-Mir-315-P1 Dgr-Mir-315-P2 Dlo-Mir-315 Dma-Mir-315 Dme-Mir-315 Dmo-Mir-315 Dpu-Mir-315 Dsi-Mir-315 Dya-Mir-315 Eba-Mir-315 Efe-Mir-315 Esc-Mir-315 Gpa-Mir-315 Gsp-Mir-315 Hru-Mir-315 Isc-Mir-315 Lan-Mir-315 Lgi-Mir-315 Lhy-Mir-315 Llo-Mir-315 Lpo-Mir-315-P3 Lpo-Mir-315-P4 Lpo-Mir-315-P5 Lpo-Mir-315-P6-v1 Lpo-Mir-315-P6-v2 Mgi-Mir-315-v1 Mgi-Mir-315-v2 Mom-Mir-315 Nag-Mir-315 Npo-Mir-315 Obi-Mir-315 Ofu-Mir-315 Ovu-Mir-315 Pau-Mir-315 Pca-Mir-315 Pcr-Mir-315 Pdu-Mir-315 Pfl-Mir-315 Pma-Mir-315 Pve-Mir-315 Rph-Mir-315 Sko-Mir-315 Sme-Mir-315 Sne-Mir-315 Snu-Mir-315 Tca-Mir-315 Tur-Mir-315 War-Mir-315

Node of Origin (locus)

Nephrozoa

Node of Origin (family)

Nephrozoa

Genome context
(Bger_2.0)

KZ616154.1: 289529-289589 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

UCAAGACAGAAGAAAGCUUGUUCUUUAUGUUUUUGAUUGUUGCUCAGAAAGCCGUGACGUUGAAGCAGGCUUUCGAGCAAUAAUCACAAUCAGAAAGGAGCAAGGAAACACCAGACAUCAA

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Structure

        10         20         30        40        50        60
UCAAGACAGAAGAAAGC-         A-| U  U            A       GUGACG 
                  UUGUUCUUU  UG UU UGAUUGUUGCUC GAAAGCC      U
                  AACGAGGAA  AC AA ACUAAUAACGAG CUUUCGG      U
AACUACAGACCACAAAGG         AG^ U  C            -       ACGAAG 
 .       110       100        90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ad	Co	Co	Di	Di	Eg	Eg	Em	Em	Em	Em	Em	Em	Em	Em	Em	Em	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ov

Mature sequence

Bge-Mir-315_5p

mirBase accession

None

Sequence

0- UUUUGAUUGUUGCUCAGAAAGCC -23

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Star sequence

Bge-Mir-315_3p*

mirBase accession

None

Sequence

39- CUUUCGAGCAAUAAUCACAAUC -61

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