MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-315

Family name MIR-315 (all species)
Seed UUUGAUU
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-315  Aga-Mir-315  Agr-Mir-315  Ava-Mir-315-P7  Ava-Mir-315-P8  Bge-Mir-315  Bko-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dgr-Mir-315-P1  Dgr-Mir-315-P2  Dlo-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Eba-Mir-315  Efe-Mir-315  Esc-Mir-315  Gpa-Mir-315  Gsp-Mir-315  Hru-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Lhy-Mir-315  Llo-Mir-315  Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1  Lpo-Mir-315-P6-v2  Mgi-Mir-315-v1  Mgi-Mir-315-v2  Mom-Mir-315  Nag-Mir-315  Npo-Mir-315  Obi-Mir-315  Ofu-Mir-315  Ovu-Mir-315  Pau-Mir-315  Pca-Mir-315  Pcr-Mir-315  Pdu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Pve-Mir-315  Rph-Mir-315  Sko-Mir-315  Sme-Mir-315  Sne-Mir-315  Snu-Mir-315  Tca-Mir-315  War-Mir-315 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587327.1: 742314-742406 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGGCAACUAAAAAUUCCAAGAUAUCGGUUUUUGAUUGUUGCUCAGAAGGCGUUUCUAACUAUCAUUUCUUAAUCAAUUUUAAAUUGAAUGGGAAAUACGCUUUCGAGCGAUGAUCAAAACACGAUGUUUAUUGGUUAAAUCAACUAAUUGU
Get precursor sequence
Structure
        10        20          30        40        50        60        70      
UUUGGCAACUAAAAAUUCCA--|       GU       UG      A       UUUCUAACUAUCAUUUCUUAAU 
                      AGAUAUCG  UUUUGAU  UUGCUC GAAGGCG                      C
                      UUUGUAGC  AAAACUA  AGCGAG CUUUCGC                      A
UGUUAAUCAACUAAAUUGGUUA^       AC       GU      -       AUAAAGGGUAAGUUAAAUUUUA 
 150       140       130       120       110        100        90        80
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr
Mature sequence

Tur-Mir-315_5p
mirBase accessionNone
Sequence 
0- UUUUGAUUGUUGCUCAGAAGGCG -23
Get sequence
Star sequence

Tur-Mir-315_3p*
mirBase accessionNone
Sequence 
71- CUUUCGAGCGAUGAUCAAAACA -93
Get sequence