MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-216-P2i

Family name MIR-216 (all species)
Seed AAUCUCA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-216-P2g  Lpo-Mir-216-P2h 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Hme-Mir-216-P2  Isc-Mir-216-P2  Pca-Mir-216-P2  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668005.1: 32569-32625 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACUUCCACACUGUUUGCAUGGUGGCGAUCUAAUCUCAUGAGGUAACUCUGGAUAGGCCUUAUUCCGGAGUACCUGCUGAGAUGUGAUAGGCACCAUAUUGUUCACCAGUCUAAGCA
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Structure
        10          20        30        40        50        
CACUUCCACACUGUUUGC--|     GCG   UA      UG     A       UAGG 
                    AUGGUG   AUC  AUCUCA  AGGUA CUCUGGA    C
                    UACCAC   UAG  UAGAGU  UCCAU GAGGCCU    C
ACGAAUCUGACCACUUGUUA^     GGA   UG      CG     -       UAUU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-216-P2i_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAUGAGGUAACUCUGGA -23
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Star sequence

Lpo-Mir-216-P2i_3p*
mirBase accessionNone
Sequence 
35- CGGAGUACCUGCUGAGAUGUGA -57
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