MirGeneDB 2.1

MirGeneDB ID

Lpo-Mir-153-P11

Family name MIR-153 (all species)
Seed UGCAUAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-153-P10  Lpo-Mir-153-P12  Lpo-Mir-153-P13  Lpo-Mir-153-P14  Lpo-Mir-153-P15 
Orthologues Asu-Mir-153  Bfl-Mir-153  Bla-Mir-153  Bpl-Mir-153  Cgi-Mir-153  Cin-Mir-153  Cte-Mir-153  Dma-Mir-153  Dpu-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Npo-Mir-153  Obi-Mir-153  Ovu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Sko-Mir-153  Sme-Mir-153  Spu-Mir-153  Xbo-Mir-153 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)
NW_013685978.1: 86-142 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACCUCAAACUAACAAGCCUUACUCGCCCAUCAUUUUUGUGAUUGAUGUAAUUCAUAUCAUACAAUUGCAUAGUCACAAAAGUGAUGGGUGGUUAAGGGCCCAUCUUCACUUCUGUU
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Structure
        10          20        30        40        50        
UACCUCAAACUAACAAG--|    CU                     A       CAUA 
                   CCUUA  CGCCCAUCAUUUUUGUGAUUG UGUAAUU    U
                   GGAAU  GUGGGUAGUGAAAACACUGAU ACGUUAA    C
UUGUCUUCACUUCUACCCG^    UG                     -       CAUA 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-153-P11_5p* (predicted)

mirBase accessionNone
Sequence
0- UCAUUUUUGUGAUUGAUGUAAUU -23
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Mature sequence

Lpo-Mir-153-P11_3p

mirBase accessionNone
Sequence
35- UUGCAUAGUCACAAAAGUGAUG -57
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