MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-1993-P3

Family name MIR-1993 (all species)
Seed AUUAUGC
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-1993-P4  Lpo-Mir-1993-P5 
Orthologues Agr-Mir-1993  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pdu-Mir-1993  Rph-Mir-1993  Sma-Mir-1993  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013669096.1: 90373-90433 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGAAUGAAAAUGAAUGCUUCAGAUUUUUUCGCGAAUGCUAGCACAAUUAUGUUAAUAACUCAGUUCAUAUUAUGCUAGUGUUCGUGGGUUAGAAUGAAGUACCAUGCUACAUGAAGAUA
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Structure
        10          20        30        40        50        60
GCUGAAUGAAAAUGAAU--|     GA  UU                CAAU    UUAAUA 
                   GCUUCA  UU  UUCGCGAAUGCUAGCA    UAUG      A
                   UGAAGU  GA  GGGUGCUUGUGAUCGU    AUAC      C
AUAGAAGUACAUCGUACCA^     AA  UU                AUU-    UUGACU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-1993-P3_5p*
mirBase accessionNone
Sequence 
0- UCGCGAAUGCUAGCACAAUUAUG -23
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Mature sequence

Lpo-Mir-1993-P3_3p
mirBase accessionNone
Sequence 
39- UAUUAUGCUAGUGUUCGUGGGU -61
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