MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-1993

Family name MIR-1993 (all species)
Seed AUUAUGC
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1993  Ava-Mir-1993-P10  Ava-Mir-1993-P11  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Efe-Mir-1993-P1  Efe-Mir-1993-P2  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Lpo-Mir-1993-P3  Lpo-Mir-1993-P4  Lpo-Mir-1993-P5  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ofu-Mir-1993-P12  Ofu-Mir-1993-P13  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pcr-Mir-1993-P14  Pcr-Mir-1993-P15  Pdu-Mir-1993  Pve-Mir-1993-P8  Pve-Mir-1993-P9  Rph-Mir-1993  Sma-Mir-1993  Sme-Mir-1993-P6  Sme-Mir-1993-P7  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049309.1: 6094964-6095021 [-]
Precursor
(pre-Mir +30nt flank)
AGAUUACAAACAACAGGGGGCAGCACAGUGUCGGGAAUCGUGGCAUGAUCCUGUGUAUAAUGCAAGUAUUAUGCUGCUAUUCACGAGGCCAACUGCUUACUUACGACACCAACCAGGA
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Structure
        10           20        30        40        50        
AGAUUACAAACAACAGG---|     CACA  G   G    C UG       C  GUGUA 
                    GGGCAG    GU UCG GAAU G  GCAUGAU CU     U
                    UUCGUC    CG AGC CUUA C  CGUAUUA GA     A
AGGACCAACCACAGCAUUCA^     AAC-  G   A    U GU       U  ACGUA 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ph
Star sequence

Snu-Mir-1993_5p*
mirBase accessionNone
Sequence 
0- UCGGGAAUCGUGGCAUGAUCCU -22
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Mature sequence

Snu-Mir-1993_3p
mirBase accessionNone
Sequence 
36- UAUUAUGCUGCUAUUCACGAGG -58
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