MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1993-P8

Family name MIR-1993 (all species)
Seed AUUAUGC
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1993-P9 
Orthologues Agr-Mir-1993  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pdu-Mir-1993  Rph-Mir-1993  Sma-Mir-1993  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Protostomia
Genome context
(PVE_manual_microRNAloci)		 CM062291.1:263611980-263612237: 101-158 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGAAGGGAUUUAACUGGCCUUCAGACUUUCGGGAAUUACGGCAGAAUGCAGUUCAGAAUACUUGUAUUAUGCUGCUAUUCACGAGAUGAGGGAGCCAAAAGCAUCUUUUCUUACAG
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Structure
        10           20          30        40        50        
GGUGAAGGGAUUUAACU---   --|    GAC     G    UA     G      GUUCA 
                    GGC  CUUCA   UUUCG GAAU  CGGCA AAUGCA     G
                    CCG  GGAGU   AGAGC CUUA  GUCGU UUAUGU     A
GACAUUCUUUUCUACGAAAA   AG^    ---     A    UC     A      UCAUA 
      110       100        90           80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pve-Mir-1993-P8_5p*
mirBase accessionNone
Sequence 
0- UCGGGAAUUACGGCAGAAUGCA -22
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Mature sequence

Pve-Mir-1993-P8_3p
mirBase accessionNone
Sequence 
36- UAUUAUGCUGCUAUUCACGAGA -58
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