MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-1993

Family name MIR-1993 (all species)
Seed AUUAUGC
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1993  Ava-Mir-1993-P10  Ava-Mir-1993-P11  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Efe-Mir-1993-P1  Efe-Mir-1993-P2  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Lpo-Mir-1993-P3  Lpo-Mir-1993-P4  Lpo-Mir-1993-P5  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ofu-Mir-1993-P12  Ofu-Mir-1993-P13  Pau-Mir-1993  Pca-Mir-1993  Pcr-Mir-1993-P14  Pcr-Mir-1993-P15  Pdu-Mir-1993  Pve-Mir-1993-P8  Pve-Mir-1993-P9  Rph-Mir-1993  Sma-Mir-1993  Sme-Mir-1993-P6  Sme-Mir-1993-P7  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01007614.1: 1412515-1412573 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGACUUUUCGAUAAAUGACUCUUACCAUUUUCGGGAAUAGUGGCAUGAUGCUGUAUACUGGAUUUUGUAUUAUGCUGUUAUUCACGAGAUUCCAGGGUCAGUUUACGUCGACACGAAGA
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Structure
        10            20        30        40        50         
UGACUUUUCGAUAAAUG----|    UACCAU     G      UG         UGUAUAC 
                     ACUCU      UUUCG GAAUAG  GCAUGAUGC       \
                     UGGGA      AGAGC CUUAUU  CGUAUUAUG       U
AGAAGCACAGCUGCAUUUGAC^    CCUU--     A      GU         UUUUAGG 
       110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-1993_5p*
mirBase accessionNone
Sequence 
0- UCGGGAAUAGUGGCAUGAUGCU -22
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Mature sequence

Ovu-Mir-1993_3p
mirBase accessionNone
Sequence 
37- UAUUAUGCUGUUAUUCACGAGA -59
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