MirGeneDB 2.1
MirGeneDB ID

Isc-Mir-1993

Family name MIR-1993 (all species)
Seed AUUAUGC
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-1993
Paralogues
Orthologues Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Cgi-Mir-1993  Cte-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Efe-Mir-1993-P1  Efe-Mir-1993-P2  Esc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Lpo-Mir-1993-P3  Lpo-Mir-1993-P4  Lpo-Mir-1993-P5  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Sme-Mir-1993-P6  Sme-Mir-1993-P7 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(IscaWI)		 DS862055: 112-174 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCCAGCUCGGCUGUCGGCGGCGCCAACCGCGUGAACACAAGCGUGAUACCGUGCUAGGCUGGACUCGGGCAUUAUGCUAGUGUUCGCGGGGCUGGUUGCGCCCGGACUCAAACAUGCGCGU
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Structure
        10          20        30        40        50         60
UUUCCAGCUCGGCUGUC--    GC    A  G         A        A-| GUGCUAG 
                   GGCG  GCCA CC CGUGAACAC AGCGUGAU  CC       G
                   CCGC  UGGU GG GCGCUUGUG UCGUAUUA  GG       C
UGCGCGUACAAACUCAGGC    GU    C  G         A        CG^ CUCAGGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Al Mi Mi Mi Sa Sa Sa Sa To
Star sequence

Isc-Mir-1993_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCGUGAACACAAGCGUGAUACC -22
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Mature sequence

Isc-Mir-1993_3p
mirBase accessionMIMAT0016929
Sequence 
41- CAUUAUGCUAGUGUUCGCGGGG -63
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