MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-1993-P10

Family name MIR-1993 (all species)
Seed CGUGAAG
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-1993-P11 
Orthologues Agr-Mir-1993  Bko-Mir-1993  Bpl-Mir-1993  Cbr-Mir-1993  Cel-Mir-1993  Csc-Mir-1993  Cte-Mir-1993  Dgr-Mir-1993  Dma-Mir-1993  Dpu-Mir-1993  Eba-Mir-1993  Egr-Mir-1993  Esc-Mir-1993  Gsa-Mir-1993  Gsp-Mir-1993  Hru-Mir-1993  Isc-Mir-1993  Lan-Mir-1993  Lgi-Mir-1993  Llo-Mir-1993  Mgi-Mir-1993  Mom-Mir-1993  Npo-Mir-1993  Obi-Mir-1993  Ovu-Mir-1993  Pau-Mir-1993  Pca-Mir-1993  Pdu-Mir-1993  Rph-Mir-1993  Sma-Mir-1993  Snu-Mir-1993  Tur-Mir-1993  War-Mir-1993 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 11585858-11585919 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGUACACACGUAUUAGUGUAAAAUCUUGUCGUGAAGACCAGCAUGAUUCGUUAGUAUAAUCAAUUCGUAUUAUGCUGAGAUUUUACGAUAUGAAAUACACUUUUGUUGCUAUUAUUAUGU
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Structure
        10           20        30        40         50          
AUUGUACACACGUAUUA---|    AAA  U          AC-         U  UUAGUAU 
                    GUGUA   UC UGUCGUGAAG   CAGCAUGAU CG       \
                    CACAU   AG AUAGCAUUUU   GUCGUAUUA GC       A
UGUAUUAUUAUCGUUGUUUU^    AA-  U          AGA         U  UUAACUA 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sr Sr
Mature sequence

Ava-Mir-1993-P10_5p
mirBase accessionNone
Sequence 
0- UCGUGAAGACCAGCAUGAUUCG -22
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Co-mature sequence

Ava-Mir-1993-P10_3p
mirBase accessionNone
Sequence 
39- UAUUAUGCUGAGAUUUUACGAUA -62
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