MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-29-P1n

Family name MIR-29 (all species)
Seed AGCACCA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-29-P1m 
Orthologues Aae-Mir-29-P1  Aga-Mir-29-P1  Agr-Mir-29-P1  Asu-Mir-29-P1  Bfl-Mir-29-P1  Bla-Mir-29-P1  Cbr-Mir-29-P1  Cel-Mir-29-P1  Cin-Mir-29-o1  Csc-Mir-29-P1  Cte-Mir-29-P1  Dan-Mir-29-P1  Dgr-Mir-29-P1  Dlo-Mir-29-P1  Dma-Mir-29-P1  Dme-Mir-29-P1  Dmo-Mir-29-P1  Dpu-Mir-29-P1  Dsi-Mir-29-P1  Dya-Mir-29-P1  Eba-Mir-29-P1  Esc-Mir-29-P1  Gpa-Mir-29-P1  Gsp-Mir-29  Hme-Mir-29-P1  Hru-Mir-29-P1  Isc-Mir-29-P1  Lhy-Mir-29-P1  Llo-Mir-29-P1  Mgi-Mir-29-P1  Mom-Mir-29-P1  Npo-Mir-29-P1  Obi-Mir-29-P1  Ofu-Mir-29-P1  Ovu-Mir-29-P1  Pau-Mir-29-P1  Pcr-Mir-29-P1  Pdu-Mir-29-P1  Pfl-Mir-29-P1  Pmi-Mir-29-P1  Pve-Mir-29-P1  Rph-Mir-29-P1  Sko-Mir-29-P1  Snu-Mir-29-P1  Spu-Mir-29-P1  Tca-Mir-29-P1  Tur-Mir-29-P1  War-Mir-29-P1  Xbo-Mir-29-P1 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013673387.1: 33099-33157 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAACAAGGUGUUUCUCUAUCUUUGGGUCACUGGGUUCGUAUGGUACAUAGAUGCAUUAGCAACUCUAGCACCAUUAGAAUUCAGUUCAUCCAGAGAUCGUGUGCUGCUCAGGAAGAA
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Structure
        10         20        30         40        50         
UUUAACAAGGUGUUUCUCU-          C-|        GU     ACA    UGCAU 
                    AUCUUUGGGU  ACUGGGUUC  AUGGU   UAGA     U
                    UAGAGACCUA  UGACUUAAG  UACCA   AUCU     A
AAGAAGGACUCGUCGUGUGC          CU^        AU     CG-    CAACG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-29-P1n_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUGGGUUCGUAUGGUACAUAGA -23
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Mature sequence

Lpo-Mir-29-P1n_3p
mirBase accessionNone
Sequence 
37- UAGCACCAUUAGAAUUCAGUUC -59
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