MirGeneDB 2.1

MirGeneDB ID

Lpo-Mir-137-P19

Family name MIR-137 (all species)
Seed UAUUGCU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-137-P16  Lpo-Mir-137-P17  Lpo-Mir-137-P18  Lpo-Mir-137-P20 
Orthologues Asu-Mir-137  Bfl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cgi-Mir-137  Cte-Mir-137  Dan-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Ebu-Mir-137  Esc-Mir-137  Hme-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Obi-Mir-137  Sko-Mir-137  Spu-Mir-137  Xbo-Mir-137 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)
NW_013667160.1: 138003-138060 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUUUUCUAAUAACAGCUUGUGUCGUUAGGUGUGUUCUUAAGCUAAUGACACUUAAUCCGUAGCUGUUAUUGCUUGAGAAUACACGUAGUGGCCAGGCGUUGUCAGCUCUCAAGCCG
Get precursor sequence
Structure
        10           20        30        40        50         
CUUUUUUCUAAUAACAG---|   U       G              U       CUUAAU 
                    CUUG GUCGUUA GUGUGUUCUUAAGC AAUGACA      \
                    GGAC CGGUGAU CACAUAAGAGUUCG UUAUUGU      C
GCCGAACUCUCGACUGUUGC^   -       G              -       CGAUGC 
      110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-137-P19_5p* (predicted)

mirBase accessionNone
Sequence
0- GUGUGUUCUUAAGCUAAUGACA -22
Get sequence
Mature sequence

Lpo-Mir-137-P19_3p

mirBase accessionNone
Sequence
37- UUAUUGCUUGAGAAUACACGU -58
Get sequence