MirGeneDB 3.0
MirGeneDB ID

Lpo-Iab-4-P3-as

Family name IAB-4 (all species)
Seed GGAUACA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Iab-4-P3  Lpo-Iab-4-P4  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666418.1: 83536-83596 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCUUCUGGACGAAACUAGAGUCGCCUGCUACGUAUACUGAAGGUAUACCGGAAAGUAAAUAAAACUCAGGAUACAGUCAGUAUACGAGCAGGAGUCUCUACCAUACUUCACACCGUUUC
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Structure
        10          20        30        40        50        60 
GCUCUUCUGGACGAAAC--|    UCG      A          AG    A  G  AAGUAA 
                   UAGAG   CCUGCU CGUAUACUGA  GUAU CC GA      \
                   AUCUC   GGACGA GCAUAUGACU  CAUA GG CU      A
CUUUGCCACACUUCAUACC^    UGA      -          GA    -  A  CAAAAU 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Iab-4-P3-as_5p*
mirBase accessionNone
Sequence 
0- UACGUAUACUGAAGGUAUACCGGA -24
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Mature sequence

Lpo-Iab-4-P3-as_3p
mirBase accessionNone
Sequence 
39- AGGAUACAGUCAGUAUACGAGC -61
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