MirGeneDB 3.0
MirGeneDB ID

Gpa-Iab-4

Family name IAB-4 (all species)
Seed CGUAUAC
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Iab-4-P1  Aae-Iab-4-P1-as  Aae-Iab-4-P2  Aae-Iab-4-P2-as  Aga-Iab-4  Aga-Iab-4-as  Bge-Iab-4  Bge-Iab-4-as  Csc-Iab-4-P6  Csc-Iab-4-P6-as  Csc-Iab-4-P7  Csc-Iab-4-P7-as  Dan-Iab-4  Dan-Iab-4-as  Dlo-Iab-4  Dlo-Iab-4-as  Dma-Iab-4  Dme-Iab-4  Dme-Iab-4-as  Dmo-Iab-4  Dmo-Iab-4-as  Dpu-Iab-4  Dpu-Iab-4-as  Dsi-Iab-4  Dsi-Iab-4-as  Dya-Iab-4  Dya-Iab-4-as  Hme-Iab-4  Hme-Iab-4-as  Isc-Iab-4  Lpo-Iab-4-P3  Lpo-Iab-4-P3-as  Lpo-Iab-4-P4  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as  Tca-Iab-4  Tca-Iab-4-as 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GpalI1)		 Scaffold177: 289202-289258 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUGUGGGCUGAAUAUGUGUCACUUCGUAUACGUAUACUGAAUGUAUCCUGAGUGCUUCCUAUCCGGUAUACCUUCAGUAUACGUAACACGAGGAGACACUAAUCAUCGAGGAAUUU
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Structure
        10         20         30        40         50       
GUUGUGGGCUGAAUAUG-    A      A-             U    -| U  GUGC 
                  UGUC CUUCGU  UACGUAUACUGAA GUAU CC GA    U
                  ACAG GGAGCA  AUGCAUAUGACUU CAUA GG CU    U
UUUAAGGAGCUACUAAUC    A      CA             C    U^ C  AUCC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
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Mature sequence

Gpa-Iab-4_5p
mirBase accessionNone
Sequence 
0- ACGUAUACUGAAUGUAUCCUGA -22
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Star sequence

Gpa-Iab-4_3p*
mirBase accessionNone
Sequence 
35- GGUAUACCUUCAGUAUACGUAA -57
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