MirGeneDB 3.0
MirGeneDB ID

Csc-Iab-4-P6

Family name IAB-4 (all species)
Seed CGUAUAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Iab-4-P6-as  Csc-Iab-4-P7  Csc-Iab-4-P7-as 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Arthropoda
Genome context
(GCF_000671375.1_CSC)		 NW_019384315.1: 245440-245497 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCGAGAAGAUUUUGUAGUUCCUCCUGUUCGUAUACUGAAUGUAUCCUGAGUGGUAUAUUUUCCGGUAUACCUUCAGUAUACGUAGCAGGGAGAACUGAUACUGCAUCAGAACUGA
Get precursor sequence
Structure
        10         20        30         40         50        
UCUUCGAGAAGAUUUUG-      CU      -           U    -| U  GUGGU 
                  UAGUUC  CCUGUU CGUAUACUGAA GUAU CC GA     \
                  GUCAAG  GGACGA GCAUAUGACUU CAUA GG CU     A
AGUCAAGACUACGUCAUA      AG      U           C    U^ C  UUUAU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Iab-4-P6_5p
mirBase accessionNone
Sequence 
0- UCGUAUACUGAAUGUAUCCUGA -22
Get sequence
Star sequence

Csc-Iab-4-P6_3p* (predicted)
mirBase accessionNone
Sequence 
36- GGUAUACCUUCAGUAUACGUAG -58
Get sequence