MirGeneDB ID | Csc-Iab-4-P7-as |
Family name |
IAB-4 (all species) |
Seed |
GGAUACA |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Iab-4-P6
Csc-Iab-4-P6-as
Csc-Iab-4-P7
|
Orthologues |
Aga-Iab-4
Bge-Iab-4
Dan-Iab-4
Dlo-Iab-4
Dma-Iab-4
Dme-Iab-4
Dmo-Iab-4
Dpu-Iab-4
Dsi-Iab-4
Dya-Iab-4
Gpa-Iab-4
Hme-Iab-4
Isc-Iab-4
Tca-Iab-4
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Arthropoda
|
Genome context (GCF_000671375.1_CSC) |
NW_019384783.1: 169682-169742 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAGGAUCGAUGAGAGCUCAGUGUCUCCUGCUACGUAUACUGAAGGUAUACCGGAAAGUAAAAUUAACUCAGGAUACAUUCAGUAUACGAACAGGAGGCAUUGCUAUGUUAACCAUCUUUUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAGGAUCGAUGAGAGCU--| CUA G A G AAGUAA
CAGUGUCUCCUG CGUAUACUGAA GUAU CC GA \
GUUACGGAGGAC GCAUAUGACUU CAUA GG CU A
UUUUUCUACCAAUUGUAUC^ AA- A - A CAAUUA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Csc-Iab-4-P7-as_5p* |
mirBase accession | None |
Sequence |
0- UACGUAUACUGAAGGUAUACCGGA -24
Get sequence
|
Mature sequence |
Csc-Iab-4-P7-as_3p |
mirBase accession | None |
Sequence |
39- AGGAUACAUUCAGUAUACGAAC -61
Get sequence
|