MirGeneDB 3.0

MirGeneDB ID

Csc-Iab-4-P7-as

Family name IAB-4 (all species)
Seed GGAUACA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Iab-4-P6  Csc-Iab-4-P6-as  Csc-Iab-4-P7 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Arthropoda
Genome context
(GCF_000671375.1_CSC)
NW_019384783.1: 169682-169742 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGAUCGAUGAGAGCUCAGUGUCUCCUGCUACGUAUACUGAAGGUAUACCGGAAAGUAAAAUUAACUCAGGAUACAUUCAGUAUACGAACAGGAGGCAUUGCUAUGUUAACCAUCUUUUU
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Structure
        10          20        30        40        50        60 
GAGGAUCGAUGAGAGCU--|           CUA           G    A  G  AAGUAA 
                   CAGUGUCUCCUG   CGUAUACUGAA GUAU CC GA      \
                   GUUACGGAGGAC   GCAUAUGACUU CAUA GG CU      A
UUUUUCUACCAAUUGUAUC^           AA-           A    -  A  CAAUUA 
 .       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Iab-4-P7-as_5p*

mirBase accessionNone
Sequence
0- UACGUAUACUGAAGGUAUACCGGA -24
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Mature sequence

Csc-Iab-4-P7-as_3p

mirBase accessionNone
Sequence
39- AGGAUACAUUCAGUAUACGAAC -61
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