MirGeneDB ID | Dlo-Iab-4-as |
Family name |
IAB-4 (all species) |
Seed |
UACGUAU |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Iab-4
|
Orthologues |
Aga-Iab-4
Aga-Iab-4-as
Bge-Iab-4
Bge-Iab-4-as
Dan-Iab-4
Dan-Iab-4-as
Dma-Iab-4
Dme-Iab-4
Dme-Iab-4-as
Dmo-Iab-4
Dmo-Iab-4-as
Dpu-Iab-4
Dpu-Iab-4-as
Dsi-Iab-4
Dsi-Iab-4-as
Dya-Iab-4
Dya-Iab-4-as
Gpa-Iab-4
Hme-Iab-4
Hme-Iab-4-as
Isc-Iab-4
Tca-Iab-4
Tca-Iab-4-as
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Arthropoda
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087226.1: 4752788-4752849 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAGAUCAUCGUCGAUCGGUGUAGCCUCCUGUUACGUAUACUGAAGGUAUACCGGACAGGAUUACACUCAGGAUACAUUCAGUAUACGUACAGGGGGCUUCACAUCACUCAUCAGAGAAGAAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAGAUCAUCGUCGAUCG---| U U G A CGGACAGGA
GUG AGCCUCCUGU ACGUAUACUGAA GUAU C \
CAC UCGGGGGACA UGCAUAUGACUU CAUA G U
CAAGAAGAGACUACUCACUA^ U - A - GACUCACAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dlo-Iab-4-as_5p |
mirBase accession | None |
Sequence |
0- UUACGUAUACUGAAGGUAUAC -21
Get sequence
|
Star sequence |
Dlo-Iab-4-as_3p* |
mirBase accession | None |
Sequence |
41- AUACAUUCAGUAUACGUACAG -62
Get sequence
|