| MirGeneDB ID | Aae-Iab-4-P1-as |
|---|
| Family name |
IAB-4 (all species) |
|---|
| Seed |
UACGUAU |
|---|
| Species |
Yellow fever mosquito (Aedes aegypti) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Aae-Iab-4-P1
Aae-Iab-4-P2
Aae-Iab-4-P2-as
|
|---|
| Orthologues |
Bge-Iab-4
Dan-Iab-4
Dma-Iab-4
Dme-Iab-4
Dmo-Iab-4
Dpu-Iab-4
Dsi-Iab-4
Dya-Iab-4
Hme-Iab-4
Isc-Iab-4
Tca-Iab-4
|
|---|
| Node of Origin (locus) |
A. aegypti
|
|---|
| Node of Origin (family) |
Arthropoda
|
|---|
Genome context
(Aaeg_L3) |
supercont1.708: 50262-50321 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCCGACUAAAGAUGAUUGUGCAGCCUCCUGUUACGUAUACUGAAGGUAUACCGGAUAGAUAGCACUCAGGAUACAUUCAGUAUACGUUCAUGAAGCAGUACGUGAGCAACGAAGUAUCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCCGACUAAAGAUGAUU--| A C C UU G A G UAGA
GUGC GC UC UG ACGUAUACUGAA GUAU CC GA U
CAUG CG AG AC UGCAUAUGACUU CAUA GG CU A
GACUAUGAAGCAACGAGUG^ A A U U- A - A CACG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Aae-Iab-4-P1-as_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUACGUAUACUGAAGGUAUACCGGA -25
Get sequence
|
|---|
| Star sequence |
Aae-Iab-4-P1-as_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AGGAUACAUUCAGUAUACGUUCA -60
Get sequence
|
|---|
