MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-76-P5

Family name MIR-76 (all species)
Seed UCGUUGU
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-76-P3  Lpo-Mir-76-P4  Lpo-Mir-76-P6  Lpo-Mir-76-P7  Lpo-Mir-76-P8 
Orthologues Aae-Mir-76  Aga-Mir-76  Agr-Mir-76  Asu-Mir-76  Bge-Mir-76  Bko-Mir-76  Bpl-Mir-76  Cbr-Mir-76  Cel-Mir-76  Cte-Mir-76  Dan-Mir-76  Dgr-Mir-76  Dlo-Mir-76  Dma-Mir-76  Dme-Mir-76  Dmo-Mir-76  Dpu-Mir-76  Dsi-Mir-76  Dya-Mir-76  Eba-Mir-76  Efe-Mir-76  Esc-Mir-76  Gpa-Mir-76  Gsa-Mir-76  Hme-Mir-76  Hru-Mir-76  Isc-Mir-76  Lgi-Mir-76  Llo-Mir-76  Mgi-Mir-76  Mom-Mir-76  Npo-Mir-76  Obi-Mir-76  Ofu-Mir-76  Ovu-Mir-76  Pau-Mir-76  Pcr-Mir-76  Pdu-Mir-76  Pmi-Mir-76  Pve-Mir-76  Rph-Mir-76  Sma-Mir-76  Snu-Mir-76  Spu-Mir-76  Tca-Mir-76  Tur-Mir-76  War-Mir-76 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668617.1: 102968-103030 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUAGCAGAAACAAAGGGAGAGGUUGCCCAGGUUUCUCGGUUAACGAAUAUGAAAAGUUUAUUUUAUUGUUCGUUGUCGUCGAAACCUGAACAAAACUCCUUGAACCAUCAGAAGAAGGUU
Get precursor sequence
Structure
        10           20        30        40        50        60 
AAAAUAGCAGAAACAAA---|    AGG   CC        UCGGU         UGAAAAGU 
                    GGGAG   UUG  CAGGUUUC     UAACGAAUA        \
                    UCCUC   AAC  GUCCAAAG     GUUGCUUGU        U
UUGGAAGAAGACUACCAAGU^    AA-   AA        CUGCU         UAUUUUAU 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-76-P5_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGGUUUCUCGGUUAACGAAUA -22
Get sequence
Mature sequence

Lpo-Mir-76-P5_3p
mirBase accessionNone
Sequence 
41- UUCGUUGUCGUCGAAACCUGAA -63
Get sequence