Mir-76

MirGeneDB ID

Pdu-Mir-76

Family name

MIR-76 (all species)

Seed

UCGUUGU

Species

Dumerils clam worm (Platynereis dumerilii)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-76 Aga-Mir-76 Agr-Mir-76 Asu-Mir-76 Ava-Mir-76-P11 Ava-Mir-76-P12 Bge-Mir-76 Bko-Mir-76 Bpl-Mir-76 Cbr-Mir-76 Cel-Mir-76 Csc-Mir-76-P10a Csc-Mir-76-P10b Cte-Mir-76 Dan-Mir-76 Dgr-Mir-76 Dlo-Mir-76 Dma-Mir-76 Dme-Mir-76 Dmo-Mir-76 Dpu-Mir-76 Dsi-Mir-76 Dya-Mir-76 Eba-Mir-76 Efe-Mir-76 Esc-Mir-76 Gpa-Mir-76 Gsa-Mir-76 Hme-Mir-76 Hru-Mir-76 Isc-Mir-76 Lan-Mir-76-P1 Lan-Mir-76-P2 Lgi-Mir-76 Llo-Mir-76 Lpo-Mir-76-P3 Lpo-Mir-76-P4 Lpo-Mir-76-P5 Lpo-Mir-76-P6 Lpo-Mir-76-P7 Lpo-Mir-76-P8 Mgi-Mir-76 Mom-Mir-76 Npo-Mir-76 Obi-Mir-76 Ofu-Mir-76 Ovu-Mir-76 Pau-Mir-76 Pcr-Mir-76 Pmi-Mir-76 Pve-Mir-76 Rph-Mir-76 Sma-Mir-76 Sme-Mir-76-P9a Sme-Mir-76-P9b Snu-Mir-76 Spu-Mir-76 Tca-Mir-76 Tur-Mir-76 War-Mir-76

Node of Origin (locus)

Nephrozoa

Node of Origin (family)

Nephrozoa

Genome context
(GCA_026936325.1_EMBL_pdum_1.0)

JAPTHN010000058.1: 1786824-1786887 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

UUGAAGAUGAUUUUGGGAGGUCCCAUCUGGACAGGUUUCACGAUUUUCGAACAUAAGACAAUUUUUAUAUGUUCGUUGUCGUCGAAACCUGCCUUGAGCAGACUCUCAGACAACUGAAACAUAC

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Structure

        10          20         30         40        50        60 
UUGAAGAUGAUUUUGGGA--    CCA  U-| A        -     UUU      UAAGACA 
                    GGUC   UC  GG CAGGUUUC ACGAU   CGAACA       A
                    UCAG   AG  CC GUCCAAAG UGCUG   GCUUGU       U
CAUACAAAGUCAACAGACUC    ACG  UU^ -        C     UU-      AUAUUUU 
  120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

24	24	24	24	24	36	36	36	36	36	48	48	48	48	48	6d	6d	6d	6d	72	72	72	72	72

Star sequence

Pdu-Mir-76_5p*

mirBase accession

None

Sequence

0- ACAGGUUUCACGAUUUUCGAACA -23

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Mature sequence

Pdu-Mir-76_3p

mirBase accession

None

Sequence

41- UUCGUUGUCGUCGAAACCUGCCU -64

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