| MirGeneDB ID | Sma-Mir-76 |
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| Family name |
MIR-76 (all species) |
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| Seed |
CAGUUUC |
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| Species |
Blood fluke (Schistosoma mansoni) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-76
Aga-Mir-76
Agr-Mir-76
Asu-Mir-76
Ava-Mir-76-P11
Ava-Mir-76-P12
Bge-Mir-76
Bko-Mir-76
Bpl-Mir-76
Cbr-Mir-76
Cel-Mir-76
Csc-Mir-76-P10a
Csc-Mir-76-P10b
Cte-Mir-76
Dan-Mir-76
Dgr-Mir-76
Dlo-Mir-76
Dma-Mir-76
Dme-Mir-76
Dmo-Mir-76
Dpu-Mir-76
Dsi-Mir-76
Dya-Mir-76
Eba-Mir-76
Efe-Mir-76
Esc-Mir-76
Gpa-Mir-76
Gsa-Mir-76
Hme-Mir-76
Hru-Mir-76
Isc-Mir-76
Lan-Mir-76-P1
Lan-Mir-76-P2
Lgi-Mir-76
Llo-Mir-76
Lpo-Mir-76-P3
Lpo-Mir-76-P4
Lpo-Mir-76-P5
Lpo-Mir-76-P6
Lpo-Mir-76-P7
Lpo-Mir-76-P8
Mgi-Mir-76
Mom-Mir-76
Npo-Mir-76
Obi-Mir-76
Ofu-Mir-76
Ovu-Mir-76
Pau-Mir-76
Pcr-Mir-76
Pdu-Mir-76
Pmi-Mir-76
Pve-Mir-76
Rph-Mir-76
Sme-Mir-76-P9a
Sme-Mir-76-P9b
Snu-Mir-76
Spu-Mir-76
Tca-Mir-76
Tur-Mir-76
War-Mir-76
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| Node of Origin (locus) |
Nephrozoa
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| Node of Origin (family) |
Nephrozoa
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Genome context
(GCA_000237925.5_SM_V9_genomic) |
HE601624.3: 37186577-37186651 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUGCUACCUUACUGUGAAUAUAGUACUAUACAGUUUCUUUGACAAUGAGACUAACUAGAAUUCAAAUAUAUCUAUACAUAAGUUCGUUGUUGAUGAAACUGGACAGUUGCACAGUAAAACAUCUGUUAUUCAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAUGCUACCUUACUGUGAAUAUA- -| AUA U UG A AACUAGAAUUCAA
GU ACU CAGUUUC U ACAAUGAG CU A
CG UGA GUCAAAG A UGUUGCUU GA U
UAACUUAUUGUCUACAAAAUGACA U^ CAG U GU - AUACAUAUCUAUA
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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Ce |
Ce |
Ce |
Eg |
Eg |
Eg |
Eg |
Eg |
Eg |
Mi |
Mi |
Sc |
Sc |
Sc |
Sm |
Sm |
Sp |
Sp |
Sp |
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| Mature sequence |
Sma-Mir-76_5p |
| mirBase accession | None |
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| Sequence |
0- ACAGUUUCUUUGACAAUGAGACU -23
Get sequence
|
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| Star sequence |
Sma-Mir-76_3p* |
| mirBase accession | None |
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| Sequence |
53- UUCGUUGUUGAUGAAACUGGAC -75
Get sequence
|
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