MirGeneDB 3.0
MirGeneDB ID

Gsa-Mir-76

Family name MIR-76 (all species)
Seed UCGUUGU
Species Russian doll killer (Gyrodactylus salaris)
MiRBase ID gsa-mir-76a
Paralogues
Orthologues Aae-Mir-76  Aga-Mir-76  Agr-Mir-76  Asu-Mir-76  Ava-Mir-76-P11  Ava-Mir-76-P12  Bge-Mir-76  Bko-Mir-76  Bpl-Mir-76  Cbr-Mir-76  Cel-Mir-76  Csc-Mir-76-P10a  Csc-Mir-76-P10b  Cte-Mir-76  Dan-Mir-76  Dgr-Mir-76  Dlo-Mir-76  Dma-Mir-76  Dme-Mir-76  Dmo-Mir-76  Dpu-Mir-76  Dsi-Mir-76  Dya-Mir-76  Eba-Mir-76  Efe-Mir-76  Esc-Mir-76  Gpa-Mir-76  Hme-Mir-76  Hru-Mir-76  Isc-Mir-76  Lan-Mir-76-P1  Lan-Mir-76-P2  Lgi-Mir-76  Llo-Mir-76  Lpo-Mir-76-P3  Lpo-Mir-76-P4  Lpo-Mir-76-P5  Lpo-Mir-76-P6  Lpo-Mir-76-P7  Lpo-Mir-76-P8  Mgi-Mir-76  Mom-Mir-76  Npo-Mir-76  Obi-Mir-76  Ofu-Mir-76  Ovu-Mir-76  Pau-Mir-76  Pcr-Mir-76  Pdu-Mir-76  Pmi-Mir-76  Pve-Mir-76  Rph-Mir-76  Sma-Mir-76  Sme-Mir-76-P9a  Sme-Mir-76-P9b  Snu-Mir-76  Spu-Mir-76  Tca-Mir-76  Tur-Mir-76  War-Mir-76 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(gyrodactylus_salaris.PRJNA244375.WBPS19.genomic)		 scf7180006950880: 2392-2454 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCGGGCUCUUGUGAUCAGACGAUAAGAUUAUUGUUUUAUCAAUAACGAUUAGAUCUAAAUAUUUGAAUAUUCGUUGUUGAAAAAAACAAGAAUUUUCGAUUGAAAAACAGCACUCUGGUAUU
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Structure
        10        20            30         40        50        60
GUCGGGCUCUUGUGAUCAGA----|  UA     A       A-          U  GAUCUAA 
                        CGA  AGAUU UUGUUUU  UCAAUAACGA UA       A
                        GCU  UUUAA AACAAAA  AGUUGUUGCU AU       U
UUAUGGUCUCACGACAAAAAGUUA^  --     G       AA          U  AAGUUUA 
 120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Gsa-Mir-76_5p*
mirBase accessionMIMAT0035286
Sequence 
0- AUUGUUUUAUCAAUAACGAUUA -22
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Mature sequence

Gsa-Mir-76_3p
mirBase accessionMIMAT0035287
Sequence 
40- UUCGUUGUUGAAAAAAACAAGAA -63
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